From b730f6447d78d4d1b3b70a8524c60fa8884be05f Mon Sep 17 00:00:00 2001
From: Sven-Hendrik Haase <svenstaro@gmail.com>
Date: Sat, 3 Aug 2024 13:20:04 +0200
Subject: [PATCH] feat: Add opentelemtry-based tracing

This adds tracing to fastapi, redis, and sqlalchemy. It uses the
recommended OLTP exporter to send the tracing data.
---
 aurweb/asgi.py       |  17 ++
 aurweb/aur_redis.py  |   3 +
 aurweb/db.py         |   5 +-
 conf/config.defaults |   3 +
 poetry.lock          | 687 ++++++++++++++++++++++++++++++++-----------
 pyproject.toml       |  11 +-
 6 files changed, 544 insertions(+), 182 deletions(-)

diff --git a/aurweb/asgi.py b/aurweb/asgi.py
index 684dc4c42..4a0c11132 100644
--- a/aurweb/asgi.py
+++ b/aurweb/asgi.py
@@ -14,6 +14,12 @@ from fastapi import FastAPI, HTTPException, Request, Response
 from fastapi.responses import RedirectResponse
 from fastapi.staticfiles import StaticFiles
 from jinja2 import TemplateNotFound
+from opentelemetry import trace
+from opentelemetry.exporter.otlp.proto.http.trace_exporter import OTLPSpanExporter
+from opentelemetry.instrumentation.fastapi import FastAPIInstrumentor
+from opentelemetry.sdk.resources import Resource
+from opentelemetry.sdk.trace import TracerProvider
+from opentelemetry.sdk.trace.export import BatchSpanProcessor
 from sqlalchemy import and_
 from starlette.exceptions import HTTPException as StarletteHTTPException
 from starlette.middleware.authentication import AuthenticationMiddleware
@@ -53,6 +59,17 @@ instrumentator().add(prometheus.http_requests_total())
 instrumentator().instrument(app)
 
 
+# Instrument FastAPI for tracing
+FastAPIInstrumentor.instrument_app(app)
+
+resource = Resource(attributes={"service.name": "aurweb"})
+otlp_endpoint = aurweb.config.get("tracing", "otlp_endpoint")
+otlp_exporter = OTLPSpanExporter(endpoint=otlp_endpoint)
+span_processor = BatchSpanProcessor(otlp_exporter)
+trace.set_tracer_provider(TracerProvider(resource=resource))
+trace.get_tracer_provider().add_span_processor(span_processor)
+
+
 async def app_startup():
     # https://stackoverflow.com/questions/67054759/about-the-maximum-recursion-error-in-fastapi
     # Test failures have been observed by internal starlette code when
diff --git a/aurweb/aur_redis.py b/aurweb/aur_redis.py
index ec66df19e..b735bb84d 100644
--- a/aurweb/aur_redis.py
+++ b/aurweb/aur_redis.py
@@ -1,4 +1,5 @@
 import fakeredis
+from opentelemetry.instrumentation.redis import RedisInstrumentor
 from redis import ConnectionPool, Redis
 
 import aurweb.config
@@ -7,6 +8,8 @@ from aurweb import aur_logging
 logger = aur_logging.get_logger(__name__)
 pool = None
 
+RedisInstrumentor().instrument()
+
 
 class FakeConnectionPool:
     """A fake ConnectionPool class which holds an internal reference
diff --git a/aurweb/db.py b/aurweb/db.py
index 8311f2bee..f1b8210f0 100644
--- a/aurweb/db.py
+++ b/aurweb/db.py
@@ -298,9 +298,12 @@ def get_engine(dbname: str = None, echo: bool = False):
             connect_args["check_same_thread"] = False
 
         kwargs = {"echo": echo, "connect_args": connect_args}
+        from opentelemetry.instrumentation.sqlalchemy import SQLAlchemyInstrumentor
         from sqlalchemy import create_engine
 
-        _engines[dbname] = create_engine(get_sqlalchemy_url(), **kwargs)
+        engine = create_engine(get_sqlalchemy_url(), **kwargs)
+        SQLAlchemyInstrumentor().instrument(engine=engine)
+        _engines[dbname] = engine
 
         if is_sqlite:  # pragma: no cover
             setup_sqlite(_engines.get(dbname))
diff --git a/conf/config.defaults b/conf/config.defaults
index 2b1579a33..d0a07d7d0 100644
--- a/conf/config.defaults
+++ b/conf/config.defaults
@@ -177,3 +177,6 @@ expiry_time_search = 600
 expiry_time_statistics = 300
 ; number of seconds after a cache entry for rss queries expires, default is 5 minutes
 expiry_time_rss = 300
+
+[tracing]
+otlp_endpoint = http://localhost:4318
diff --git a/poetry.lock b/poetry.lock
index 0a21501ad..0753f8c82 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -513,6 +513,23 @@ ssh = ["bcrypt (>=3.1.5)"]
 test = ["certifi", "cryptography-vectors (==43.0.0)", "pretend", "pytest (>=6.2.0)", "pytest-benchmark", "pytest-cov", "pytest-xdist"]
 test-randomorder = ["pytest-randomly"]
 
+[[package]]
+name = "deprecated"
+version = "1.2.14"
+description = "Python @deprecated decorator to deprecate old python classes, functions or methods."
+optional = false
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+files = [
+    {file = "Deprecated-1.2.14-py2.py3-none-any.whl", hash = "sha256:6fac8b097794a90302bdbb17b9b815e732d3c4720583ff1b198499d78470466c"},
+    {file = "Deprecated-1.2.14.tar.gz", hash = "sha256:e5323eb936458dccc2582dc6f9c322c852a775a27065ff2b0c4970b9d53d01b3"},
+]
+
+[package.dependencies]
+wrapt = ">=1.10,<2"
+
+[package.extras]
+dev = ["PyTest", "PyTest-Cov", "bump2version (<1)", "sphinx (<2)", "tox"]
+
 [[package]]
 name = "dnspython"
 version = "2.6.1"
@@ -601,18 +618,18 @@ probabilistic = ["pyprobables (>=0.6,<0.7)"]
 
 [[package]]
 name = "fastapi"
-version = "0.112.0"
+version = "0.112.1"
 description = "FastAPI framework, high performance, easy to learn, fast to code, ready for production"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "fastapi-0.112.0-py3-none-any.whl", hash = "sha256:3487ded9778006a45834b8c816ec4a48d522e2631ca9e75ec5a774f1b052f821"},
-    {file = "fastapi-0.112.0.tar.gz", hash = "sha256:d262bc56b7d101d1f4e8fc0ad2ac75bb9935fec504d2b7117686cec50710cf05"},
+    {file = "fastapi-0.112.1-py3-none-any.whl", hash = "sha256:bcbd45817fc2a1cd5da09af66815b84ec0d3d634eb173d1ab468ae3103e183e4"},
+    {file = "fastapi-0.112.1.tar.gz", hash = "sha256:b2537146f8c23389a7faa8b03d0bd38d4986e6983874557d95eed2acc46448ef"},
 ]
 
 [package.dependencies]
 pydantic = ">=1.7.4,<1.8 || >1.8,<1.8.1 || >1.8.1,<2.0.0 || >2.0.0,<2.0.1 || >2.0.1,<2.1.0 || >2.1.0,<3.0.0"
-starlette = ">=0.37.2,<0.38.0"
+starlette = ">=0.37.2,<0.39.0"
 typing-extensions = ">=4.8.0"
 
 [package.extras]
@@ -649,6 +666,23 @@ docs = ["furo (>=2023.9.10)", "sphinx (>=7.2.6)", "sphinx-autodoc-typehints (>=1
 testing = ["covdefaults (>=2.3)", "coverage (>=7.3.2)", "diff-cover (>=8.0.1)", "pytest (>=7.4.3)", "pytest-asyncio (>=0.21)", "pytest-cov (>=4.1)", "pytest-mock (>=3.12)", "pytest-timeout (>=2.2)", "virtualenv (>=20.26.2)"]
 typing = ["typing-extensions (>=4.8)"]
 
+[[package]]
+name = "googleapis-common-protos"
+version = "1.63.2"
+description = "Common protobufs used in Google APIs"
+optional = false
+python-versions = ">=3.7"
+files = [
+    {file = "googleapis-common-protos-1.63.2.tar.gz", hash = "sha256:27c5abdffc4911f28101e635de1533fb4cfd2c37fbaa9174587c799fac90aa87"},
+    {file = "googleapis_common_protos-1.63.2-py2.py3-none-any.whl", hash = "sha256:27a2499c7e8aff199665b22741997e485eccc8645aa9176c7c988e6fae507945"},
+]
+
+[package.dependencies]
+protobuf = ">=3.20.2,<4.21.1 || >4.21.1,<4.21.2 || >4.21.2,<4.21.3 || >4.21.3,<4.21.4 || >4.21.4,<4.21.5 || >4.21.5,<6.0.0.dev0"
+
+[package.extras]
+grpc = ["grpcio (>=1.44.0,<2.0.0.dev0)"]
+
 [[package]]
 name = "greenlet"
 version = "3.0.3"
@@ -874,13 +908,13 @@ files = [
 
 [[package]]
 name = "importlib-metadata"
-version = "8.2.0"
+version = "8.0.0"
 description = "Read metadata from Python packages"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "importlib_metadata-8.2.0-py3-none-any.whl", hash = "sha256:11901fa0c2f97919b288679932bb64febaeacf289d18ac84dd68cb2e74213369"},
-    {file = "importlib_metadata-8.2.0.tar.gz", hash = "sha256:72e8d4399996132204f9a16dcc751af254a48f8d1b20b9ff0f98d4a8f901e73d"},
+    {file = "importlib_metadata-8.0.0-py3-none-any.whl", hash = "sha256:15584cf2b1bf449d98ff8a6ff1abef57bf20f3ac6454f431736cd3e660921b2f"},
+    {file = "importlib_metadata-8.0.0.tar.gz", hash = "sha256:188bd24e4c346d3f0a933f275c2fec67050326a856b9a359881d7c2a697e8812"},
 ]
 
 [package.dependencies]
@@ -932,153 +966,149 @@ i18n = ["Babel (>=2.7)"]
 
 [[package]]
 name = "lxml"
-version = "5.2.2"
+version = "5.3.0"
 description = "Powerful and Pythonic XML processing library combining libxml2/libxslt with the ElementTree API."
 optional = false
 python-versions = ">=3.6"
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@@ -1086,7 +1116,7 @@ cssselect = ["cssselect (>=0.7)"]
 html-clean = ["lxml-html-clean"]
 html5 = ["html5lib"]
 htmlsoup = ["BeautifulSoup4"]
-source = ["Cython (>=3.0.10)"]
+source = ["Cython (>=3.0.11)"]
 
 [[package]]
 name = "mako"
@@ -1109,13 +1139,13 @@ testing = ["pytest"]
 
 [[package]]
 name = "markdown"
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+version = "3.7"
 description = "Python implementation of John Gruber's Markdown."
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 name = "orjson"
 version = "3.10.7"
@@ -1382,22 +1616,22 @@ starlette = ">=0.30.0,<1.0.0"
 
 [[package]]
 name = "protobuf"
-version = "5.27.3"
+version = "4.25.4"
 description = ""
 optional = false
 python-versions = ">=3.8"
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 socks = ["PySocks (>=1.5.6,!=1.5.7)"]
 use-chardet-on-py3 = ["chardet (>=3.0.2,<6)"]
 
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+description = "Easily download, build, install, upgrade, and uninstall Python packages"
+optional = false
+python-versions = ">=3.8"
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+
 [[package]]
 name = "six"
 version = "1.16.0"
@@ -1868,13 +2118,13 @@ parse = ">=1.19.0,<2.0.0"
 
 [[package]]
 name = "starlette"
-version = "0.37.2"
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 description = "The little ASGI library that shines."
 optional = false
 python-versions = ">=3.8"
 files = [
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 ]
 
 [package.dependencies]
@@ -1925,13 +2175,13 @@ files = [
 
 [[package]]
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-version = "0.13.0"
+version = "0.13.2"
 description = "Style preserving TOML library"
 optional = false
 python-versions = ">=3.8"
 files = [
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 [[package]]
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 [[package]]
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 description = "The lightning-fast ASGI server."
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 python-versions = ">=3.8"
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 [package.dependencies]
@@ -2096,6 +2346,85 @@ MarkupSafe = ">=2.1.1"
 [package.extras]
 watchdog = ["watchdog (>=2.3)"]
 
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+    {file = "wrapt-1.16.0-cp39-cp39-win_amd64.whl", hash = "sha256:eb1b046be06b0fce7249f1d025cd359b4b80fc1c3e24ad9eca33e0dcdb2e4a35"},
+    {file = "wrapt-1.16.0-py3-none-any.whl", hash = "sha256:6906c4100a8fcbf2fa735f6059214bb13b97f75b1a61777fcf6432121ef12ef1"},
+    {file = "wrapt-1.16.0.tar.gz", hash = "sha256:5f370f952971e7d17c7d1ead40e49f32345a7f7a5373571ef44d800d06b1899d"},
+]
+
 [[package]]
 name = "wsproto"
 version = "1.2.0"
@@ -2112,13 +2441,13 @@ h11 = ">=0.9.0,<1"
 
 [[package]]
 name = "zipp"
-version = "3.19.2"
+version = "3.20.0"
 description = "Backport of pathlib-compatible object wrapper for zip files"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "zipp-3.19.2-py3-none-any.whl", hash = "sha256:f091755f667055f2d02b32c53771a7a6c8b47e1fdbc4b72a8b9072b3eef8015c"},
-    {file = "zipp-3.19.2.tar.gz", hash = "sha256:bf1dcf6450f873a13e952a29504887c89e6de7506209e5b1bcc3460135d4de19"},
+    {file = "zipp-3.20.0-py3-none-any.whl", hash = "sha256:58da6168be89f0be59beb194da1250516fdaa062ccebd30127ac65d30045e10d"},
+    {file = "zipp-3.20.0.tar.gz", hash = "sha256:0145e43d89664cfe1a2e533adc75adafed82fe2da404b4bbb6b026c0157bdb31"},
 ]
 
 [package.extras]
@@ -2128,4 +2457,4 @@ test = ["big-O", "importlib-resources", "jaraco.functools", "jaraco.itertools",
 [metadata]
 lock-version = "2.0"
 python-versions = ">=3.9,<3.13"
-content-hash = "78584caa1629a9fd1893be2d27507b8bf27cc0e5a3290948743b139776d9f279"
+content-hash = "cdaee4150621ad16f75fd9bea0dd3e48f4b9717750dd905bbb63413e20ee9a76"
diff --git a/pyproject.toml b/pyproject.toml
index 535d955fe..f6b5008c8 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -69,7 +69,6 @@ httpx = "^0.27.0"
 itsdangerous = "^2.1.2"
 lxml = "^5.2.1"
 orjson = "^3.10.0"
-protobuf = "^5.26.1"
 pygit2 = "^1.14.1"
 python-multipart = "^0.0.9"
 redis = "^5.0.3"
@@ -89,7 +88,6 @@ SQLAlchemy = "^1.4.52"
 uvicorn = "^0.30.0"
 gunicorn = "^22.0.0"
 Hypercorn = "^0.17.0"
-prometheus-fastapi-instrumentator = "^7.0.0"
 pytest-xdist = "^3.5.0"
 filelock = "^3.13.3"
 posix-ipc = "^1.1.1"
@@ -98,6 +96,15 @@ fastapi = "^0.112.0"
 srcinfo = "^0.1.2"
 tomlkit = "^0.13.0"
 
+# Tracing
+prometheus-fastapi-instrumentator = "^7.0.0"
+opentelemetry-api = "^1.26.0"
+opentelemetry-sdk = "^1.26.0"
+opentelemetry-exporter-otlp-proto-http = "^1.26.0"
+opentelemetry-instrumentation-fastapi = "^0.47b0"
+opentelemetry-instrumentation-redis = "^0.47b0"
+opentelemetry-instrumentation-sqlalchemy = "^0.47b0"
+
 [tool.poetry.dev-dependencies]
 coverage = "^7.4.4"
 pytest = "^8.1.1"
-- 
GitLab